PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ciclev10025971m
Common NameCICLE_v10025963mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 353aa    MW: 37104.6 Da    PI: 4.7709
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ciclev10025971mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_175.85.8e-24256318163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN+ L++el++l++e++kl+se+
  Ciclev10025971m 256 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLSNENRNLRDELQRLSEECEKLTSEN 318
                      89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.5E-33194IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165964.1E-7117223No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-20251315No hitNo description
SMARTSM003382.2E-22256320IPR004827Basic-leucine zipper domain
PfamPF001706.1E-21256318IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.587258321IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.85E-12259315No hitNo description
CDDcd147027.77E-25261311No hitNo description
PROSITE patternPS000360263278IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MGTGEENTSA KTAKTASSTQ EIPTTPSYAD WSSSMQAFYG AGATPPPFFA STVASPTPHP  60
YLWGSQHPLM PPYGTPVPYQ AIYPPGGVYA HPSMATTPTA APTNTEPEGK GPEAKDRASA  120
KKSKGTPGGK AGEIVKATSG SGNDGVSQSA ESGSDGSSDA SDENGNQQEF AGGKKGSFDQ  180
MLADANTENN TAEAVPGSVP GKPVVSMPAT NLNIGMDLWN TSPAAAGAAK MRTNPSGASP  240
AVAPAGIMPD QWIQDERELK RQKRKQSNRE SARRSRLRKQ AECEELQARV ETLSNENRNL  300
RDELQRLSEE CEKLTSENNS IKEDLSRLCG PEAVANLEQS NPTQSCGEEE NS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1272278RRSRLRK
2272279RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ccl.24940.0abscission zone| flower| fruit
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006425722.10.0hypothetical protein CICLE_v10025963mg
RefseqXP_006425723.10.0hypothetical protein CICLE_v10025963mg
RefseqXP_006425726.10.0hypothetical protein CICLE_v10025963mg
RefseqXP_006425724.10.0hypothetical protein CICLE_v10025963mg
RefseqXP_006466754.10.0PREDICTED: G-box-binding factor 1 isoform X1
RefseqXP_006466753.10.0PREDICTED: G-box-binding factor 1 isoform X1
RefseqXP_006466752.10.0PREDICTED: G-box-binding factor 1 isoform X1
SwissprotP427741e-127GBF1_ARATH; G-box-binding factor 1
TrEMBLV4SPD20.0V4SPD2_9R
STRINGPOPTR_0007s12460.11e-175(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.13e-98G-box binding factor 1